STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3225Putative high-affinity iron permease. (272 aa)    
Predicted Functional Partners:
soxA
Sulfur oxidation protein SoxA.
     
 0.774
soxD
Sulfite dehydrogenase cytochrome subunit SoxD.
     
 0.774
CSIRO_3740
Aerobic fumarate hydratase class 1; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.659
tyrA
TyrA protein.
  
 
 0.647
CSIRO_1232
TonB-dependent siderophore receptor.
   
  
 0.641
ctaA
Heme A synthase, cytochrome oxidase biogenesis protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
       0.599
ccoP
Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
     
  0.467
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
     
  0.467
soxX
Sulfur oxidation protein SoxX.
     
  0.467
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
     
  0.467
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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