STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3229Hypothetical protein. (395 aa)    
Predicted Functional Partners:
CSIRO_3228
Hypothetical protein.
 
     0.849
CSIRO_1654
Outer membrane protein/protective antigen.
 
     0.772
CSIRO_3234
Hypothetical protein.
 
   
 0.772
CSIRO_3230
Lipopolysaccharide biosynthesis.
 
   
 0.764
cpaD
Flp pilus assembly protein CpaD.
  
     0.756
CSIRO_3819
Hypothetical protein.
  
     0.753
CSIRO_1251
Hypothetical protein.
 
     0.748
CSIRO_3594
Hypothetical protein.
  
     0.738
CSIRO_3590
Hypothetical protein.
  
     0.737
CSIRO_1524
Hypothetical protein.
 
    0.736
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.