Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmdGDP-mannose 4,6 dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (363 aa)    
Predicted Functional Partners:
fcl
GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.987
CSIRO_3233
Putative glycosyl transferase.
  
  
 0.957
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.937
CSIRO_0429
UDP-glucose dehydrogenase.
    
 0.784
CSIRO_1105
Nucleotidyltransferase.
    
 0.684
CSIRO_3255
Glycosyl transferase, group 1.
  
 
 0.672
CSIRO_3836
NAD-dependent epimerase/dehydratase.
  
 0.662
CSIRO_3256
GDP-mannose 4,6 dehydratase.
 
    
0.634
CSIRO_3262
Hypothetical protein.
  
 
 0.613
CSIRO_3253
Putative O-antigen export system ATP-binding protein.
  
  
 0.594
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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