CSIRO_3284 protein (Bradyrhizobiaceae bacterium SG6C)

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Score

CSIRO_3284

Hypothetical protein. (196 aa)

Predicted Functional Partners:

rpmF

0.929

rpsC

0.922

rpsP

0.900

rpsF

0.896

rplD

0.896

rplK

0.895

rplM

0.889

rpsB

0.888

rplU

0.886

infC

0.885

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_3284	infC	CSIRO_3284	CSIRO_0869	Hypothetical protein.	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.885
CSIRO_3284	rplD	CSIRO_3284	CSIRO_3499	Hypothetical protein.	LSU ribosomal protein L4p; Forms part of the polypeptide exit tunnel.	0.896
CSIRO_3284	rplK	CSIRO_3284	CSIRO_3523	Hypothetical protein.	LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.895
CSIRO_3284	rplM	CSIRO_3284	CSIRO_3219	Hypothetical protein.	LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.889
CSIRO_3284	rplU	CSIRO_3284	CSIRO_0786	Hypothetical protein.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.886
CSIRO_3284	rpmF	CSIRO_3284	CSIRO_0687	Hypothetical protein.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.929
CSIRO_3284	rpsB	CSIRO_3284	CSIRO_2750	Hypothetical protein.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.888
CSIRO_3284	rpsC	CSIRO_3284	CSIRO_3494	Hypothetical protein.	SSU ribosomal protein S3p; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.922
CSIRO_3284	rpsF	CSIRO_3284	CSIRO_2611	Hypothetical protein.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.896
CSIRO_3284	rpsP	CSIRO_3284	CSIRO_1085	Hypothetical protein.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.900
infC	CSIRO_3284	CSIRO_0869	CSIRO_3284	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Hypothetical protein.	0.885
infC	rplD	CSIRO_0869	CSIRO_3499	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L4p; Forms part of the polypeptide exit tunnel.	0.941
infC	rplK	CSIRO_0869	CSIRO_3523	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.939
infC	rplM	CSIRO_0869	CSIRO_3219	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.971
infC	rplU	CSIRO_0869	CSIRO_0786	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.939
infC	rpmF	CSIRO_0869	CSIRO_0687	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.908
infC	rpsB	CSIRO_0869	CSIRO_2750	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.993
infC	rpsC	CSIRO_0869	CSIRO_3494	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3p; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.991
infC	rpsF	CSIRO_0869	CSIRO_2611	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.986
infC	rpsP	CSIRO_0869	CSIRO_1085	Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.954