Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSIRO_3329Soluble lytic murein transglycosylase precursor. (724 aa)    
Predicted Functional Partners:
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.635
CSIRO_3330
Alpha/beta hydrolase fold-containing protein.
       0.620
CSIRO_4092
Hypothetical protein.
  
     0.547
mscL
Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.511
CSIRO_0261
Hypothetical protein.
  
     0.497
CSIRO_1824
Hypothetical protein.
  
     0.492
CSIRO_3165
Hypothetical protein.
  
     0.489
CSIRO_2609
Hypothetical protein.
  
     0.473
CSIRO_1641
GCN5-like N-acetyltransferase.
  
     0.457
CSIRO_2767
ComEC/Rec2-related protein.
 
     0.451
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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