Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_3331Putative outer membrane protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (500 aa)    
Predicted Functional Partners:
lptD
Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.856
CSIRO_0739
Outer-membrane immunogenic protein.
  
 
 0.850
CSIRO_1717
Porin.
  
 
 0.845
CSIRO_2863
Transmembrane region-containing protein.
  
 
 0.843
CSIRO_0163
Hypothetical protein.
  
 
 0.812
CSIRO_0162
Hypothetical protein.
  
 
 0.795
CSIRO_0237
Putative outer membrane protein.
  
 
 0.794
CSIRO_3561
TonB-dependent receptor.
    
 0.787
CSIRO_3303
Hypothetical protein.
  
     0.772
CSIRO_0150
Hypothetical protein.
  
     0.767
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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