STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3341Major facilitator superfamily permease. (383 aa)    
Predicted Functional Partners:
CSIRO_3340
Enoyl-(acyl-carrier-protein) reductase.
       0.607
CSIRO_3343
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.605
CSIRO_1521
Hypothetical protein.
    
  0.602
CSIRO_3342
Hypothetical protein.
       0.572
CSIRO_0507
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase; Bifunctional; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.544
CSIRO_0729
Anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.469
CSIRO_0164
Fosmidomycin resistance protein.
  
  
 0.443
CSIRO_0289
DNA helicase.
    
 0.400
CSIRO_4234
DNA helicase.
    
 0.400
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.