STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3387ATPase. (321 aa)    
Predicted Functional Partners:
CSIRO_3561
TonB-dependent receptor.
    
 
 0.860
CSIRO_0753
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.739
parB
Chromosome partitioning protein ParB; Belongs to the ParB family.
  
 
 0.696
cobS
Aerobic cobaltochelatase, CobS subunit.
    
 0.633
CSIRO_0113
Hypothetical protein.
  
 
 0.632
CSIRO_4195
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.632
panC
Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.589
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.511
dnaA-2
Chromosomal replication initiator protein DnaA; Belongs to the DnaA family.
 
 
 0.509
CSIRO_1312
Hypothetical protein.
  
     0.493
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.