STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3389Hypothetical protein. (145 aa)    
Predicted Functional Partners:
CSIRO_3390
Hypothetical protein.
       0.634
CSIRO_0219
Hypothetical protein.
  
     0.541
CSIRO_3391
Hypothetical protein.
       0.522
CSIRO_1766
Hypothetical protein.
  
     0.504
CSIRO_3360
NTP pyrophosphohydrolase.
  
     0.496
CSIRO_0642
Hypothetical protein.
  
     0.491
CSIRO_1709
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.489
CSIRO_0527
Two-component hybrid sensor and regulator.
  
     0.481
yacG
Protein of unknown function DUF329; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
  
     0.478
CSIRO_1708
Threonine dehydrogenase-like protein.
  
     0.460
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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