STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3408Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
CSIRO_3343
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.729
CSIRO_2057
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.669
CSIRO_3407
Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
 
     0.659
CSIRO_2563
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.630
CSIRO_0077
Regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.586
yeiE
Transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
  
     0.563
CSIRO_0424
Hydrogen peroxide response regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.523
CSIRO_0520
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.488
CSIRO_3423
Hydrogen peroxide response regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.458
CSIRO_0737
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.453
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.