STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3418S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (375 aa)    
Predicted Functional Partners:
CSIRO_1957
Alcohol dehydrogenase.
    
 0.967
CSIRO_2185
Iron-containing alcohol dehydrogenase.
    
 0.967
CSIRO_0339
Hypothetical protein.
  
  
 0.851
tadA-2
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.828
CSIRO_2624
Alcohol dehydrogenase.
  
 
0.823
CSIRO_2229
Alcohol dehydrogenase.
  
 
0.821
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
    
 0.787
CSIRO_3397
Aldo/keto reductase family oxidoreductase.
   
 0.700
CSIRO_0392
Fatty acid desaturase; Bifunctional.
  
  
  0.690
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.679
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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