Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_3423Hydrogen peroxide response regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
CSIRO_0337
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.619
CSIRO_4184
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.611
CSIRO_3424
Periplasmic binding protein.
       0.606
CSIRO_0737
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.571
CSIRO_2642
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.524
CSIRO_2227
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.494
CSIRO_0520
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.480
CSIRO_3425
Hypothetical protein.
       0.480
CSIRO_3408
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.458
CSIRO_0268
Glutamate synthase (NADPH) large chain.
     
 0.442
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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