STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3459ATPase. (257 aa)    
Predicted Functional Partners:
CSIRO_3458
Hypothetical protein.
       0.615
flhB
Flagellar biosynthesis protein FlhB.
       0.614
CSIRO_3460
Hypothetical protein.
       0.592
CSIRO_3461
Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.
 
     0.585
CSIRO_3039
Putative oxidoreductase.
  
     0.569
CSIRO_0661
BioC-like SAM-dependent methyltransferase.
  
     0.529
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.525
CSIRO_3462
AAA family ATPase.
       0.501
CSIRO_0647
DnaJ-like domain-containing protein.
  
   
 0.500
CSIRO_0867
2-hydroxymuconic semialdehyde hydrolase.
  
     0.497
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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