STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3465Zinc-containing alcohol dehydrogenase / quinone oxidoreductase (NADPH:quinone reductase). (337 aa)    
Predicted Functional Partners:
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
   
 0.611
CSIRO_2234
Cytochrome P450.
   
 
 0.593
CSIRO_3464
Cinnamoyl ester hydrolase.
       0.592
CSIRO_3672
Quinone oxidoreductase.
  
     0.546
CSIRO_3463
Serine protease precursor MucD/AlgY; Associated with sigma factor RpoE; Belongs to the peptidase S1C family.
  
    0.490
CSIRO_1307
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.450
CSIRO_1439
Bifunctional; enoyl-CoA hydratase/ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.450
CSIRO_1691
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional.
  
 0.450
CSIRO_2425
Biotin carboxylase.
     
 0.441
CSIRO_2662
NAD-dependent malic enzyme.
    
 0.416
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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