STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3471Putative transcriptional regulator, TetR family. (215 aa)    
Predicted Functional Partners:
CSIRO_3473
Hypothetical protein.
 
     0.830
CSIRO_3472
3-oxoacyl-(acyl-carrier protein) reductase.
 
     0.790
CSIRO_2238
Hypothetical protein.
  
     0.660
CSIRO_1991
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase.
  
     0.528
CSIRO_0764
Hypothetical protein.
  
     0.519
CSIRO_2707
Transcriptional regulator, TetR family.
  
     0.509
CSIRO_2232
Hypothetical protein.
  
     0.491
CSIRO_2237
Polyhydroxyalkanoic acid synthase.
  
     0.479
CSIRO_3470
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.465
CSIRO_4114
Hypothetical protein.
  
     0.441
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.