STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3509Phospholipid-lipopolysaccharide ABC transporter. (654 aa)    
Predicted Functional Partners:
CSIRO_2959
ABC transporter.
   
0.887
CSIRO_1216
Hypothetical protein.
  
0.823
CSIRO_2465
HlyB/MsbA-like ABC transporter.
  
 
0.823
CSIRO_4047
ABC-type multidrug transport system, ATPase component.
  
0.807
CSIRO_3510
Hypothetical protein.
 
   
 0.805
CSIRO_3668
Hypothetical protein.
  
 0.800
CSIRO_3641
ABC transporter ATP-binding protein.
   
0.795
CSIRO_1303
Hypothetical protein.
  
  
  0.791
CSIRO_1849
Acetylspermidine deacetylase.
   
 0.784
CSIRO_2691
Hypothetical protein.
  
  
  0.782
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.