STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3519Isoquinoline 1-oxidoreductase beta subunit. (729 aa)    
Predicted Functional Partners:
CSIRO_3520
Isoquinoline 1-oxidoreductase alpha subunit.
 0.988
CSIRO_1181
Isoquinoline 1-oxidoreductase alpha subunit.
 0.949
CSIRO_2078
Isoquinoline 1-oxidoreductase alpha subunit.
 0.916
CSIRO_3518
Hypothetical protein.
 
    0.874
CSIRO_0775
Carbon monoxide dehydrogenase small chain.
 
 0.743
CSIRO_3647
Putative XdhC/CoxF family protein.
 
 
 0.733
CSIRO_3646
Carbon monoxide dehydrogenase F protein.
 
 
 0.730
CSIRO_0047
Carbon monoxide dehydrogenase small chain.
 
 0.712
CSIRO_3651
Carbon monoxide dehydrogenase small chain.
  
 0.683
CSIRO_0048
Carbon monoxide dehydrogenase medium chain.
  
 0.610
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.