STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3541Hypothetical protein. (270 aa)    
Predicted Functional Partners:
CSIRO_3540
cAMP-binding protein.
       0.773
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
   
 0.760
CSIRO_1206
Putative metal-binding enzyme.
  
  
 
0.691
CSIRO_3542
Hypothetical protein.
       0.661
CSIRO_1851
Glyoxalase family protein.
  
  
  0.633
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.632
CSIRO_3091
Lactoylglutathione lyase.
     
 0.597
CSIRO_4093
Hypothetical protein.
  
  0.566
CSIRO_3539
Nodulation protein nolNO.
  
    0.518
CSIRO_0731
Rhodanese-related sulfurtransferase.
   
  0.463
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.