STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3558Putative beta-lactamase. (403 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.691
CSIRO_3557
Hypothetical protein.
       0.563
CSIRO_2833
Beta N-acetyl-glucosaminidase.
  
 
 0.483
CSIRO_3570
Glyoxalase/bleomycin resistance protein.
  
  
  0.454
CSIRO_2134
4-hydroxyphenylpyruvate dioxygenase.
  
  
  0.447
CSIRO_3556
Hypothetical protein.
       0.440
CSIRO_1459
NLP/P60 family lipoprotein.
  
 
 0.436
ftsI
Cell division protein FtsI.
     
 0.434
CSIRO_4082
N-acetylmuramoyl-L-alanine amidase.
     
 0.434
CSIRO_3170
Multimodular transpeptidase-transglycosylase; Bifunctional.
     
 0.423
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.