Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3563Hypothetical protein. (180 aa)    
Predicted Functional Partners:
CSIRO_0272
TPR domain-containing protein.
  
 0.686
CSIRO_0798
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
   
 
 0.666
CSIRO_2433
Cellulose biosynthesis protein.
  
 0.660
CSIRO_3406
TPR repeat-containing protein.
  
 0.660
CSIRO_3765
Hypothetical protein.
  
 0.646
CSIRO_4097
Hypothetical protein.
 
 
  0.631
CSIRO_2049
Hypothetical protein.
  
     0.626
CSIRO_1808
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.594
CSIRO_0327
N-methyltransferase.
 
     0.588
CSIRO_3139
Hypothetical protein.
  
     0.575
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.