STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3594Hypothetical protein. (109 aa)    
Predicted Functional Partners:
CSIRO_2352
Hypothetical protein.
  
     0.771
CSIRO_3784
Hypothetical protein.
  
     0.768
CSIRO_3819
Hypothetical protein.
  
     0.768
flgL
Flagellar hook-associated protein FlgL.
  
     0.766
CSIRO_3768
Hypothetical protein.
  
     0.765
CSIRO_2403
Hypothetical protein.
  
     0.764
CSIRO_2899
AMP-dependent synthetase and ligase.
  
     0.755
CSIRO_3765
Hypothetical protein.
  
     0.755
fliH
Flagellar assembly protein FliH.
  
     0.751
CSIRO_1173
Hypothetical protein.
  
     0.740
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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