Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_3605Isocitrate dehydrogenase (NADP). (796 aa)    
Predicted Functional Partners:
CSIRO_0637
4Fe-4S ferredoxin, iron-sulfur binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.959
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.939
CSIRO_0268
Glutamate synthase (NADPH) large chain.
     
 0.917
CSIRO_0828
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.812
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.799
CSIRO_3699
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.758
CSIRO_3670
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.748
CSIRO_0814
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.742
CSIRO_2209
NAD-specific glutamate dehydrogenase/ NADP-specific glutamate dehydrogenase; Bifunctional; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.694
CSIRO_0270
Glutamate synthase (NADPH) small chain.
   
 
 0.691
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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