Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_3608enoyl-CoA hydratase (valine degradation). (323 aa)    
Predicted Functional Partners:
CSIRO_2538
3-hydroxyisobutyryl-CoA hydrolase.
   
  0.852
CSIRO_0701
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.777
CSIRO_1403
3-ketoacyl-CoA thiolase@ Acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.777
CSIRO_3961
Short-chain specific acyl-CoA dehydrogenase.
  
  0.731
CSIRO_0741
Two-component sensor histidine kinase.
    
 0.715
CSIRO_0920
Two-component hybrid sensor and regulator.
    
 0.715
CSIRO_2016
Two-component hybrid sensor and regulator.
    
 0.715
CSIRO_1689
butyryl-CoA dehydrogenase.
   
  0.709
CSIRO_2098
acyl-CoA dehydrogenase, short-chain specific.
  
  0.706
CSIRO_2537
Branched-chain acyl-CoA dehydrogenase.
   
  0.697
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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