STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3609Putative quinone oxidoreductase. (346 aa)    
Predicted Functional Partners:
CSIRO_2541
Acyl dehydratase.
  0.736
CSIRO_2476
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
  0.692
CSIRO_2624
Alcohol dehydrogenase.
  
 
 0.634
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
   
 0.611
CSIRO_3610
2-hydroxychromene-2-carboxylate isomerase.
       0.596
CSIRO_2234
Cytochrome P450.
   
 
 0.593
CSIRO_3535
Hypothetical protein.
  
  0.562
CSIRO_3964
Hypothetical protein.
  
  0.477
CSIRO_2618
3-oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
  0.471
CSIRO_1617
butyryl-CoA dehydrogenase.
  
  0.466
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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