Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3640Nitrate ABC transporter permease. (382 aa)    
Predicted Functional Partners:
CSIRO_3641
ABC transporter ATP-binding protein.
 
 0.999
CSIRO_1216
Hypothetical protein.
 
 0.982
CSIRO_4047
ABC-type multidrug transport system, ATPase component.
 
 
 0.981
CSIRO_3642
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.968
cysA
Sulfate and thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
 
  0.928
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
  0.923
CSIRO_2152
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
   
  0.921
CSIRO_4009
ABC transporter, ATPase subunit.
 
   
  0.890
lptB
Lipopolysaccharide ABC transporter ATP-binding protein LptB.
   
  0.886
CSIRO_3815
Methionine ABC transporter ATP-binding protein.
   
  0.879
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.