STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3677DNA-binding HTH domain-containing protein. (382 aa)    
Predicted Functional Partners:
yapH
YapH protein.
 
     0.753
CSIRO_2224
Hypothetical protein.
  
     0.740
CSIRO_3865
Hypothetical protein.
  
     0.715
CSIRO_2223
Glycosyl transferase.
  
     0.672
CSIRO_4011
Hypothetical protein.
  
     0.627
CSIRO_0251
Hypothetical protein.
  
     0.605
CSIRO_2225
Hypothetical protein.
  
     0.597
CSIRO_2226
Hypothetical protein.
  
     0.566
CSIRO_3508
Hypothetical protein.
  
     0.562
CSIRO_1023
Hypothetical protein.
  
     0.530
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.