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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3697Putative multidrug resistance efflux pump protein. (367 aa)    
Predicted Functional Partners:
CSIRO_3698
Major facilitator superfamily protein.
 
 0.976
CSIRO_4089
Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily.
 
 0.901
CSIRO_0700
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.890
CSIRO_3005
NodT family RND efflux system.
 
 0.819
CSIRO_2308
TolC precursor.
 
 0.774
CSIRO_2990
Type I secretion outer membrane protein.
 
 0.774
CSIRO_2958
Agglutination protein.
  
 0.760
CSIRO_2415
Major facilitator superfamily permease.
 
 0.758
CSIRO_4141
Hypothetical protein.
  
 0.693
CSIRO_2550
Major facilitator superfamily permease.
 
 0.668
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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