STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_37232-hydroxychromene-2-carboxylate isomerase. (218 aa)    
Predicted Functional Partners:
CSIRO_0277
Arsenate reductase.
   
 
 0.943
CSIRO_2568
Glutathione-dependent thiol reductase; Belongs to the ArsC family.
   
 
 0.943
CSIRO_3724
Hypothetical protein.
       0.590
CSIRO_3195
Hypothetical protein.
  
  
 0.563
flgD
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
 
   0.464
CSIRO_1379
Hypothetical protein.
  
 
 0.448
dsbA
Thiol:disulfide interchange protein DsbA.
  
 
 0.448
CSIRO_3176
Hypothetical protein.
  
 
 0.448
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.