STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3799Universal stress protein F. (141 aa)    
Predicted Functional Partners:
CSIRO_3798
Hypothetical protein.
    
  0.630
CSIRO_3797
Hypothetical protein.
       0.558
CSIRO_2365
Sensory box histidine kinase/response regulator.
  
  
 0.489
CSIRO_3796
FAD dependent oxidoreductase.
       0.463
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.442
CSIRO_1275
methylated-DNA--protein-cysteine methyltransferase.
  
    0.431
CSIRO_1223
Methylated-DNA--protein-cysteine methyltransferase.
   
    0.426
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.