STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3814Hypothetical protein. (276 aa)    
Predicted Functional Partners:
CSIRO_3815
Methionine ABC transporter ATP-binding protein.
 0.998
CSIRO_3816
ABC-type transport system permease; Involved in resistance to organic solvents.
 
 0.998
motB
Flagellar motor rotation protein MotB.
   
   0.739
CSIRO_3817
Muconate cycloisomerase.
       0.627
motB-2
Flagellar motor rotation protein MotB.
   
   0.605
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
    
 0.529
CSIRO_3819
Hypothetical protein.
 
  
  0.529
ftsE
ATP-binding protein FtsE.
    
  0.495
lptD
Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.487
CSIRO_0454
Hypothetical protein.
    
  0.466
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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