STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3814Hypothetical protein. (276 aa)    
Predicted Functional Partners:
CSIRO_3815
Methionine ABC transporter ATP-binding protein.
 0.999
CSIRO_3816
ABC-type transport system permease; Involved in resistance to organic solvents.
 
 0.999
motB
Flagellar motor rotation protein MotB.
   
   0.882
motB-2
Flagellar motor rotation protein MotB.
   
   0.757
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
  0.636
ftsE
ATP-binding protein FtsE.
    
  0.581
CSIRO_3819
Hypothetical protein.
 
  
  0.542
CSIRO_0454
Hypothetical protein.
    
  0.537
CSIRO_3817
Muconate cycloisomerase.
       0.536
CSIRO_1253
OmpA/MotB-like protein.
 
 
 0.487
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.