Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_3815Methionine ABC transporter ATP-binding protein. (257 aa)    
Predicted Functional Partners:
CSIRO_3816
ABC-type transport system permease; Involved in resistance to organic solvents.
 
 0.999
CSIRO_3814
Hypothetical protein.
 0.998
CSIRO_3640
Nitrate ABC transporter permease.
   
  0.879
znuB
Zinc ABC transporter inner membrane permease protein ZnuB.
     
  0.699
lptB
Lipopolysaccharide ABC transporter ATP-binding protein LptB.
    
  0.653
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
     
  0.630
CSIRO_2035
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.630
CSIRO_2091
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.630
malK
Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
     
  0.630
CSIRO_3975
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.630
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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