STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3839Hypothetical protein. (469 aa)    
Predicted Functional Partners:
CSIRO_3838
Hypothetical protein.
  
    0.778
CSIRO_3840
FkbM family domain-containing methyltransferase.
       0.773
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.493
CSIRO_3836
NAD-dependent epimerase/dehydratase.
  
    0.472
CSIRO_3837
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.454
CSIRO_3634
Dolichol-phosphate mannosyltransferase-like protein.
  
 
 0.412
CSIRO_1251
Hypothetical protein.
   
 
  0.401
CSIRO_2008
Polysaccharide deacetylase.
   
 
  0.401
CSIRO_2665
Hypothetical protein.
   
 
  0.401
CSIRO_3228
Hypothetical protein.
   
 
  0.401
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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