Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_3856UDP-N-acetylglucosamine 4,6-dehydratase. (348 aa)    
Predicted Functional Partners:
CSIRO_3855
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.984
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.945
CSIRO_3269
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.927
CSIRO_3857
N-acetylneuraminate synthase.
 
  
 0.924
CSIRO_3230
Lipopolysaccharide biosynthesis.
  
 
 0.921
CSIRO_3859
Pseudaminic acid cytidylyltransferase.
 
   
 0.915
CSIRO_3832
DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.857
CSIRO_3850
N-Acetylneuraminate cytidylyltransferase.
 
  
 0.790
CSIRO_3849
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.780
CSIRO_3837
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.731
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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