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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3857N-acetylneuraminate synthase. (358 aa)    
Predicted Functional Partners:
CSIRO_3859
Pseudaminic acid cytidylyltransferase.
 
 
 0.991
CSIRO_3850
N-Acetylneuraminate cytidylyltransferase.
 
 
 0.953
CSIRO_3856
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.943
CSIRO_3855
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.934
CSIRO_3858
Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.844
CSIRO_3849
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.797
CSIRO_3846
Hypothetical protein.
 
   
 0.713
CSIRO_3269
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.678
CSIRO_0785
Hypothetical protein.
     
 0.676
CSIRO_3270
GCN5-related N-acetyltransferase.
 
 
 0.674
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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