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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3872Hypothetical protein. (430 aa)    
Predicted Functional Partners:
CSIRO_3233
Putative glycosyl transferase.
  
  
 0.919
CSIRO_3875
ADP-heptose-lipooligosaccharide heptosyltransferase II.
 
 
 0.881
CSIRO_3871
UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.878
hldE
ADP-heptose synthase/ D-glycero-beta-D-manno-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
     
 0.824
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
     
 0.754
CSIRO_3878
Lipopolysaccharide heptosyltransferase I.
  
 
 0.715
CSIRO_2337
Colicin V production protein.
  
    0.709
CSIRO_4095
Hypothetical protein.
  
     0.705
CSIRO_4011
Hypothetical protein.
 
   
 0.693
CSIRO_2340
Hypothetical protein.
  
     0.688
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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