STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3885Hypothetical protein. (143 aa)    
Predicted Functional Partners:
CSIRO_3886
Flavin-binding family monooxygenase.
       0.787
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.537
CSIRO_3508
Hypothetical protein.
  
   
 0.508
CSIRO_3887
Hypothetical protein.
       0.459
phnF
Transcriptional regulator PhnF.
  
    0.446
CSIRO_0411
Chloride peroxidase.
  
  
  0.425
CSIRO_3654
3-carboxy-cis,cis-muconate cycloisomerase.
    
 0.424
CSIRO_3670
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.424
CSIRO_2230
Putative acetyl-CoA synthetase.
 
  
  0.405
CSIRO_0557
Phosphoglucosamine mutase/ Phosphomannomutase; Bifunctional.
  
  
  0.401
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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