STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3901Hypothetical protein. (300 aa)    
Predicted Functional Partners:
ftsK
Cell division protein FtsK.
    
 
 0.953
CSIRO_0798
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
  
  0.930
CSIRO_2319
Serine protease precursor.
  
 0.891
CSIRO_3809
Hypothetical protein.
  
 0.889
CSIRO_0081
TonB-dependent receptor.
    
 
 0.875
CSIRO_2161
TonB-dependent hemin ferrichrome receptor.
    
 
 0.875
CSIRO_3070
Hypothetical protein.
    
 
 0.871
CSIRO_2963
Flagellar hook-length control protein.
  
 0.827
CSIRO_2479
Acyl carrier protein.
   
 
 0.826
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.826
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.