STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3909Hypothetical protein. (152 aa)    
Predicted Functional Partners:
CSIRO_0297
Signal transduction histidine kinase.
  
     0.592
CSIRO_3908
vitamin-B12 independent methionine synthase.
 
     0.576
CSIRO_3910
Glutathione S-transferase-like protein.
       0.516
CSIRO_1792
Signal transduction histidine kinase.
  
     0.503
CSIRO_0489
Hypothetical protein.
  
     0.496
CSIRO_1497
DNA-directed RNA polymerase specialized sigma subunit.
  
     0.491
CSIRO_3912
ATPase-like activator of Hsp90.
       0.490
CSIRO_3911
Transcriptional regulator, ArsR family.
       0.485
CSIRO_1027
Two-component response regulator.
  
     0.484
CSIRO_2841
CheY-like response regulator protein.
  
     0.474
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.