Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_3936Putative hydroxyproline dehydratase; Belongs to the CoA-transferase III family. (399 aa)    
Predicted Functional Partners:
CSIRO_2662
NAD-dependent malic enzyme.
     
 0.664
CSIRO_3740
Aerobic fumarate hydratase class 1; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.638
CSIRO_3935
Phenylacetate-coenzyme A ligase.
       0.627
CSIRO_2327
methylmalonyl-CoA mutase.
    
 0.609
CSIRO_2329
methylmalonyl-CoA mutase.
    
 0.609
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
    
 0.478
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
     
  0.444
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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