STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3949Hypothetical protein; Belongs to the CoA-transferase III family. (394 aa)    
Predicted Functional Partners:
CSIRO_3950
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.790
CSIRO_3948
Hypothetical protein.
       0.723
CSIRO_2327
methylmalonyl-CoA mutase.
    
 0.709
CSIRO_2329
methylmalonyl-CoA mutase.
    
 0.709
CSIRO_3947
Fe-S protein.
  
  
 0.668
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
    
 0.466
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
    
 0.457
CSIRO_4176
Putative oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
  
 
 0.441
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.