Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSIRO_3952methylglutaconyl-CoA hydratase. (258 aa)    
Predicted Functional Partners:
CSIRO_3954
geranyl-CoA carboxylase carboxyl transferase subunit.
  
 
  0.901
CSIRO_3953
methylcrotonyl-CoA carboxylase biotin-containing subunit.
  
  0.889
CSIRO_3955
long-chain-fatty-acid--CoA ligase.
  
  0.862
CSIRO_3951
Hypothetical protein.
       0.834
CSIRO_3957
butyryl-CoA dehydrogenase.
  
  0.766
CSIRO_2538
3-hydroxyisobutyryl-CoA hydrolase.
  
  
 
0.755
CSIRO_3958
citronellyl-CoA dehydrogenase.
  
  0.751
CSIRO_0741
Two-component sensor histidine kinase.
    
 0.715
CSIRO_0920
Two-component hybrid sensor and regulator.
    
 0.715
CSIRO_2016
Two-component hybrid sensor and regulator.
    
 0.715
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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