STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3956Hypothetical protein. (287 aa)    
Predicted Functional Partners:
CSIRO_3951
Hypothetical protein.
 
    
0.707
CSIRO_3122
Cyclase.
 
    0.694
CSIRO_3955
long-chain-fatty-acid--CoA ligase.
       0.633
CSIRO_0350
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
 
  
  0.628
CSIRO_3952
methylglutaconyl-CoA hydratase.
      0.624
CSIRO_3954
geranyl-CoA carboxylase carboxyl transferase subunit.
       0.608
CSIRO_3953
methylcrotonyl-CoA carboxylase biotin-containing subunit.
       0.604
CSIRO_4044
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.548
CSIRO_0772
3-oxoadipate CoA-transferase subunit B.
 
  
 0.517
CSIRO_3957
butyryl-CoA dehydrogenase.
       0.512
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.