Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3965Hypothetical protein. (399 aa)    
Predicted Functional Partners:
CSIRO_3969
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.907
CSIRO_3970
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.890
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.855
CSIRO_1434
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.850
CSIRO_3968
Branched-chain amino acid transport ATP-binding protein.
 
 
  0.849
CSIRO_1435
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.840
CSIRO_3967
ABC transporter ATP-binding protein.
 
 
  0.840
CSIRO_2060
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.727
CSIRO_1437
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
  
 
  0.716
CSIRO_2253
Branched-chain amino acid transport ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.706
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.