STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3983Hypothetical protein. (388 aa)    
Predicted Functional Partners:
CSIRO_3984
Ferrichrome-iron receptor.
 
   
 0.856
CSIRO_3982
Hypothetical protein.
  
    0.804
CSIRO_3981
Phosphohydrolase.
       0.746
CSIRO_1706
Putative outer membrane protein.
 
   
 0.540
CSIRO_1230
TonB-dependent receptor.
 
   
 0.523
CSIRO_1232
TonB-dependent siderophore receptor.
 
  
 0.468
CSIRO_1514
Sulfite reductase (NADPH) hemoprotein beta-component.
  
  
 0.467
CSIRO_3985
AraC family transcriptional regulator.
       0.434
CSIRO_1511
Sulfate adenylyltransferase subunit 2.
     
 0.415
CSIRO_1516
Phosphoadenylyl-sulfate reductase/ adenylyl-sulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.415
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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