Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_3990Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family. (333 aa)    
Predicted Functional Partners:
CSIRO_3991
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.994
CSIRO_3989
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
 
  0.989
CSIRO_3993
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
  0.978
CSIRO_3988
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
 
  0.976
CSIRO_3922
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.924
CSIRO_1239
Benzoate transport protein, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.898
CSIRO_2024
High-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.882
CSIRO_1893
Putative urea/short-chain amide transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.880
CSIRO_2154
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.876
CSIRO_2143
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.871
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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