Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3997Transcriptional regulator, IclR family. (262 aa)    
Predicted Functional Partners:
CSIRO_4229
Transcriptional regulator, IclR family.
  
     0.736
CSIRO_2812
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
  0.653
CSIRO_3996
Ferredoxin reductase.
 
     0.644
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
  
    0.636
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
  
    0.611
CSIRO_1422
P-hydroxybenzoate hydroxylase.
 
   
 0.540
CSIRO_3987
Protocatechuate 3,4-dioxygenase beta chain.
 
   
 0.535
CSIRO_3986
Protocatechuate 3,4-dioxygenase alpha chain.
 
   
 0.523
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
     
  0.518
CSIRO_1946
4-carboxymuconolactone decarboxylase.
 
   
 0.509
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.