Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_39985-carboxymethyl-2-hydroxymuconate delta isomerase. (114 aa)    
Predicted Functional Partners:
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.756
CSIRO_4042
Putative decarboxylase.
  
 
 0.627
CSIRO_3999
Hypothetical protein.
       0.590
CSIRO_1611
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
 
 0.575
CSIRO_4164
Fumarylacetoacetate hydrolase family protein.
  
 
 0.575
CSIRO_2858
Fumarylacetoacetase.
  
 
 0.487
CSIRO_3881
Fumarylacetoacetate hydrolase.
  
 
 0.487
CSIRO_1615
Aldehyde dehydrogenase/ coniferyl aldehyde dehydrogenase; Bifunctional; Belongs to the aldehyde dehydrogenase family.
  
  
 0.473
CSIRO_2256
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.466
CSIRO_3833
Oxidoreductase-like protein.
     
  0.434
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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