STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4010ABC transporter permease protein. (519 aa)    
Predicted Functional Partners:
CSIRO_4009
ABC transporter, ATPase subunit.
 0.999
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
 0.848
CSIRO_3010
Amino acid ABC transporter, permease protein.
     
 0.831
CSIRO_0711
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
     
 0.755
CSIRO_1284
ABC transporter.
     
 0.755
CSIRO_2414
Extracellular solute-binding protein.
     
 0.755
CSIRO_3012
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
     
 0.755
CSIRO_1919
ABC-type tungstate transport system, ATP-binding protein.
     
 0.727
CSIRO_3009
ABC transporter related protein.
 
   
 0.727
CSIRO_0173
Hypothetical protein.
    
  0.706
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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