rsmH protein (Bradyrhizobiaceae bacterium SG6C)

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rsmH

rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (394 aa)

Predicted Functional Partners:

ftsI

0.947

truA

0.844

CSIRO_4080

0.837

rpsP

0.815

rpsI

0.799

rpsK

0.785

rpsG

0.785

CSIRO_4093

0.767

rpsF

0.740

frr

0.734

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_4080	ftsI	CSIRO_4080	CSIRO_4079	Hypothetical protein.	Cell division protein FtsI.	0.876
CSIRO_4080	rsmH	CSIRO_4080	CSIRO_4081	Hypothetical protein.	rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.837
CSIRO_4093	rsmH	CSIRO_4093	CSIRO_4081	Hypothetical protein.	rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.767
CSIRO_4093	truA	CSIRO_4093	CSIRO_0540	Hypothetical protein.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.908
frr	rpsF	CSIRO_2753	CSIRO_2611	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.944
frr	rpsG	CSIRO_2753	CSIRO_3504	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	SSU ribosomal protein S7p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.951
frr	rpsI	CSIRO_2753	CSIRO_3218	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	SSU ribosomal protein S9p; Belongs to the universal ribosomal protein uS9 family.	0.961
frr	rpsK	CSIRO_2753	CSIRO_3477	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	SSU ribosomal protein S11p; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.946
frr	rpsP	CSIRO_2753	CSIRO_1085	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.918
frr	rsmH	CSIRO_2753	CSIRO_4081	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.734
ftsI	CSIRO_4080	CSIRO_4079	CSIRO_4080	Cell division protein FtsI.	Hypothetical protein.	0.876
ftsI	rsmH	CSIRO_4079	CSIRO_4081	Cell division protein FtsI.	rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.947
rpsF	frr	CSIRO_2611	CSIRO_2753	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	0.944
rpsF	rpsG	CSIRO_2611	CSIRO_3504	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	SSU ribosomal protein S7p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rpsF	rpsI	CSIRO_2611	CSIRO_3218	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	SSU ribosomal protein S9p; Belongs to the universal ribosomal protein uS9 family.	0.998
rpsF	rpsK	CSIRO_2611	CSIRO_3477	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	SSU ribosomal protein S11p; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rpsF	rpsP	CSIRO_2611	CSIRO_1085	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rpsF	rsmH	CSIRO_2611	CSIRO_4081	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.740
rpsF	truA	CSIRO_2611	CSIRO_0540	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.444
rpsG	frr	CSIRO_3504	CSIRO_2753	SSU ribosomal protein S7p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.	0.951