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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_4123Putative bacterioferritin. (94 aa)    
Predicted Functional Partners:
CSIRO_4122
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.983
CSIRO_2340
Hypothetical protein.
  
     0.771
CSIRO_0261
Hypothetical protein.
  
     0.766
CSIRO_0241
Hypothetical protein.
  
     0.761
CSIRO_0268
Glutamate synthase (NADPH) large chain.
    
 0.726
CSIRO_2347
Hypothetical protein.
  
     0.717
CSIRO_3395
Hypothetical protein.
  
     0.683
CSIRO_0998
Hypothetical protein.
  
     0.680
CSIRO_0652
Hypothetical protein.
  
     0.676
CSIRO_1824
Hypothetical protein.
  
     0.672
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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